Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117357g00001 GCTGCTATACTTTACTCTTCAGGTACTACAGGAGTAAGCAAAGGTGTTGTTTTGACACATGCGAATCTCATAACCATAATGAAACTACTCTGCTGGTCTGCTGATGTATCTGCAGCTCAAGATGATGTTTTCCTAGCCTTCATTCCAATGTTTCATATCTATGGACTGATGTTCTTTGGATTAGGGCTGTTGTGTGTTGGTGTTACGACAGTTTTGATGCAGAAATATGATTTCCAATCTATGCTTGTCGCTATCGAGAAGTACAAAGTTAATAACATACCAGCAGTGCCACCGGTGATCCATTCGTTGGTGAAACACGCAAGCAAAAATCGGTCWGACTTGTCTAGCCTAAGAMGAGTTGGCTCAGGTGCTGCACCTTTGAGTAAGGAAATGTCACAGGAGTTCAGAAAGATRTTTCCTTCGGTTGAACTAAGGTCGGGTTATGGACTAACAGAAAGTTGTGGGGGAGCAACATTTTTCGGGTCGGATAAAGATGCTGAAGCTCATCCAGAAGCATGTGGCAAGTTGATTCCAACTTTTTGTGCAAAAGTGATAGATATTGAAACAGGAAAGCCTTTGCCTCCTCACAAGGAAGGAGAGCTATGGCTGAAAAGTGCTACTATTATGAAAGAA 633 0.4202 AAILYSSGTTGVSKGVVLTHANLITIMKLLCWSADVSAAQDDVFLAFIPMFHIYGLMFFGLGLLCVGVTTVLMQKYDFQSMLVAIEKYKVNNIPAVPPVIHSLVKHASKNRSDLSSLRRVGSGAAPLSKEMSQEFRKXFPSVELRSGYGLTESCGGATFFGSDKDAEAHPEACGKLIPTFCAKVIDIETGKPLPPHKEGELWLKSATIMKE 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117357g00001 211 ProSitePatterns Putative AMP-binding domain signature. 3 14 IPR020845 -
Trme117357g00001 211 SUPERFAMILY Acetyl-CoA synthetase-like 1 210 - -
Trme117357g00001 211 Gene3D - 1 211 IPR042099 -
Trme117357g00001 211 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 1 210 - -
Trme117357g00001 211 Pfam AMP-binding enzyme 1 210 IPR000873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117357g00001 Trme-Chr117357 2 634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117357g00001 1 210 Monolignol Biosynthesis Gene Families AT4G19010 42.791 1.56e-48 165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117357g00001 K10526 - gmx:100796728 343.199