Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117336g00001 AGTTGTCATAGAAACTTTCATCGGAAAGAGACAGTTGTTGTGCCCGAAGATGTGACACCTTTTCCGTTCAATAACCCATGCCACCCTTCAACTTCGACTCCTTTCACAGTGTATTATCATACATCAAATGGTAATCATCATGTGACCGGAGCATCAAGGGGGACTGGAACTACTTTAGCTCTACCTTCGTCTGATGGAGCCCACATCTCGAGGGGGGGTGCTGAAGAAAATGTTCATGTTCATCATGTTTTAGAGCATATCCAAGGTGGTGGAGAACGTTCGTCGAATTCGAAGAAAAGGTTCAGGACGAAGTTCACTACCAAACAAAAGGAGATGATGATGGATTTTGCTTCGACATTGGGTTGGAAGATCCAAAAGAAAGATGGGAATATTGTTGATGAGTTTTGTAAGCAAATTGGGGTGCAGCGTCATGTATTTAACATTTGGATACATAACAACAAGCATACCCTGGGTAAAATGCCCTAG 486 0.428 SCHRNFHRKETVVVPEDVTPFPFNNPCHPSTSTPFTVYYHTSNGNHHVTGASRGTGTTLALPSSDGAHISRGGAEENVHVHHVLEHIQGGGERSSNSKKRFRTKFTTKQKEMMMDFASTLGWKIQKKDGNIVDEFCKQIGVQRHVFNIWIHNNKHTLGKMP 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117336g00001 161 FunFam Zinc-finger homeodomain protein 2 87 159 - -
Trme117336g00001 161 SUPERFAMILY Homeodomain-like 85 159 IPR009057 -
Trme117336g00001 161 PANTHER ZINC-FINGER HOMEODOMAIN PROTEIN 2 2 157 - -
Trme117336g00001 161 NCBIfam homeobox domain, ZF-HD class 98 154 IPR006455 -
Trme117336g00001 161 Gene3D - 85 158 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117336g00001 Trme-Chr117336 1 486 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117336g00001 2 157 ZF-HD Transcription Factor Family AT4G24660 36.709 5.13e-24 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117336g00001 - - mtr:11410439 155.606