Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11726g00001 ATGGCAAAAGAACAAATTCAGGTGCTAAATGCACTTGATGTGGCTAAAACACAATGGTATCATTTCACTGCAATCGTCATAGCTGGTATGGGATTCTTCACTGATGCATATGATTTGTTCTGTATATCCCTTGTTACCAAGTTGCTTGGCCGCATATACTACCACGTTGAGGGTGCGGGAAAGCCCGGTACATTGCCACCCAATGTATCAGCTGCTGTAAATGGTGTTGCTTTCTGTGGAACACTTTTAGGGCAGCTTTTCTTTGGCTGGCTAGGGGATAAGTTGGGAAGAAAAAAAGTCTACGGCATGACCCTCATGACGATGATAATCTGCTCTGTTTGTTCTGGCCTTTCTTTTGGACACACTCCAAAATCTGTTATGACAACTCTTTGCTTCTTCCGCTTCTGGCTTGGGTTCGGTATTGGTGGAGACTACCCTCTTTCCGCTACCATAATGTCAGAGTATTCTAATAAGAAGACTCGAGGCGCCTTCATTGCTGCTGTCTTTGCCATGCAAGGTTTTGGAATTTTGGCAGGTGGTGTATTTGCAATCATAATTTCATCCGCATTCAACACTTGGTTTGATGCACCATCATATGCGGTTGATCCAGTTCGGTCAACTGTTCGACAAGCAGACTACATGTGGAGGATAATTGTGATGGTNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNCGGTCGAAGATGCCAGAAACCGCTCGTTACACTGCTTTAGTTGCTAAGAACACGGCACAGGCTGCAGCAGATATGTCTAAGGTTCTGCAGGTTGAGATTGAAGCTGAACAGCGGAAAGAGGAGCCAGAAAAGACTAAATCATATGGCTTGTTCTCAAAAGAGTTCTTCCGTCGACATGGAATACATCTACTTGGTACATCAAGCACTTGGTTCTTGCTTGATATAGCATTTTATAGCCAAAATCTCTTTCAGAAAGATATTTTCAGCGCAATTGGTTGGATACCTGCTCCACAAACCATGAATGCAATTGAAGAGGTGTACAAAATTGCGAGAGCTCAAACGCTTATTGCTCTATGCAGTACAGTTCCAGGCTACTGGTTTACAGTNNNTNNNNNNNNNNGAATTGGGAGATTTAAAATCCAATTGATGGGATTCTTCTTTATGACCGTCTTCATGTTTTCTCTTGCTATTCCTTATGAACATTGGACTCATAAGGAAAACAGAATAGGATTTGTGGTGATGTATTCCTTGACCTTCTTCTTTGCAAATTTTGGGCCTAATGCTACAACATTTGTTGTGCCGGCAGAGATTTTCCCTGCTAGATTCCGATCNNNNNNTNNNNNNNNNNTNNNNNNNNNNGGGAAGCTTGGAGCTATGGTTGGTGCATTTGGGTTCTTGTATTTGGCACAAAACCAGGACAAGAGTAAAGCTGATGCAGGGTACCCTGCAGGTATTGGTGTGAAGAATTCACTGATTCTCTTGGGTGTGGTTAACATTTTGGGGTTCTTGTGTACTTTCATGGTACCTGAGGCAAGTGGAAAATCTTTAGAGGAGATGTC 1535 0.4098 MAKEQIQVLNALDVAKTQWYHFTAIVIAGMGFFTDAYDLFCISLVTKLLGRIYYHVEGAGKPGTLPPNVSAAVNGVAFCGTLLGQLFFGWLGDKLGRKKVYGMTLMTMIICSVCSGLSFGHTPKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGVFAIIISSAFNTWFDAPSYAVDPVRSTVRQADYMWRIIVMVXXXXXXXXXXXRSKMPETARYTALVAKNTAQAAADMSKVLQVEIEAEQRKEEPEKTKSYGLFSKEFFRRHGIHLLGTSSTWFLLDIAFYSQNLFQKDIFSAIGWIPAPQTMNAIEEVYKIARAQTLIALCSTVPGYWFTVXXXXXIGRFKIQLMGFFFMTVFMFSLAIPYEHWTHKENRIGFVVMYSLTFFFANFGPNATTFVVPAEIFPARFRSXXXXXXXXXGKLGAMVGAFGFLYLAQNQDKSKADAGYPAGIGVKNSLILLGVVNILGFLCTFMVPEASGKSLEEMS 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11726g00001 512 SUPERFAMILY MFS general substrate transporter 12 511 IPR036259 -
Trme11726g00001 512 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 21 503 - -
Trme11726g00001 512 NCBIfam phosphate:H+ symporter 11 512 IPR004738 GO:0005315|GO:0006817|GO:0016020
Trme11726g00001 512 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 505 IPR020846 GO:0022857
Trme11726g00001 512 Pfam Sugar (and other) transporter 25 511 IPR005828 GO:0016020|GO:0022857|GO:0055085
Trme11726g00001 512 Gene3D MFS general substrate transporter like domains 20 512 IPR036259 -
Trme11726g00001 512 CDD MFS_PhT 25 502 - -
Trme11726g00001 512 FunFam Inorganic phosphate transporter 1-6 20 512 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11726g00001 Trme-Chr11726 1 1535 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11726g00001 1 512 Inorganic Solute Cotransporters AT2G38940 80.583 0.0 862
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11726g00001 K08176 - gmx:100819445 868.611