Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117154g00001 GCACATCTTGTTGGTCCTTCATCCACACCTAACAGGGTTGCCGGCTACCGTGCTCCCGAAGTAACTGATCCACGGAAAGTTTCTCAGAAAGCAGATGTATACAGCTTTGGTGTATTGCTCTTGGAACTTCTGACTGGGAAGGCTCCAACTCATGCCCTCTTGAACGACGAAGGAGTCGACCTTCCGAGATGGGTGCAATCGGTTGTTAAAGAAGAATGGACTTCTGAGGTCTTTGATCTTGAACTCCTTAGGTATCAAAATGTTGAAGAGGAAATGGTTCAGTTGTTGCAACTTGCAGTAGATTGCGCTGCCACTTACCCCGATAACCGCCCTTCGATGTCCCAAGTGAGACAGCACATAGAAGAGCTGCATAGGTCTAGCTTGAAAGAAAGTCTAGACCAAATTGAACAACCTGATGACATAGATGATAACTCCTCTAGATGA 444 0.464 AHLVGPSSTPNRVAGYRAPEVTDPRKVSQKADVYSFGVLLLELLTGKAPTHALLNDEGVDLPRWVQSVVKEEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAATYPDNRPSMSQVRQHIEELHRSSLKESLDQIEQPDDIDDNSSR 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117154g00001 147 MobiDBLite consensus disorder prediction 128 147 - -
Trme117154g00001 147 Gene3D Transferase(Phosphotransferase) domain 1 3 145 - -
Trme117154g00001 147 SUPERFAMILY Protein kinase-like (PK-like) 14 120 IPR011009 -
Trme117154g00001 147 ProSiteProfiles Protein kinase domain profile. 1 122 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme117154g00001 147 Pfam Protein kinase domain 15 119 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme117154g00001 147 PANTHER OS05G0588300 PROTEIN 8 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117154g00001 Trme-Chr117154 192 635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117154g00001 1 127 Receptor kinase-like Gene Family AT3G17840 61.832 1.82e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Trme117154g00001 Pkinase 2.1e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117154g00001 - - gmx:100781597 251.136