Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme117070g00001 GAGAAATGCACCGGAGTGTTCAACGGTTTGGAGTCATTGGTTGATGTTGGAGGAGGCACTGGGACCATGGCAAAGGCGCTTGCTAAATCATTCCCAAAAATGGAGTGCACCGTATTTGATCTCTCACATGTTGTCGATGGCTTGCAAGGAAGTGATAACTTAAACTACGTTGGTGGAGACATGTTTAAGAAAATTCCTCCGGCTGATGCGATTTTGTTGAAGTGGATATTACATGATTGGAATGACGAAGAATGTGTAAAGATATTAAAAAATTGTAAGGATGCAATCGCGAACAAAGGTAAAAAAGCGAAGGTGATTATCATAGATATGGTGGTCGACAAAGAGAAGGGAAATGGTGAATCGGTTGAAACACAACTCTTCTTTGATATGCTAATGATGGTGTTGGCCTCCGGAAAAGAAAGAACCAAGAAAGAATGGATTAAGTTGATTTCTTCAGCTGGTTTTAGTGACTATAAGATAACTCCAATTTTAGGACTAAGATC 503 0.3996 EKCTGVFNGLESLVDVGGGTGTMAKALAKSFPKMECTVFDLSHVVDGLQGSDNLNYVGGDMFKKIPPADAILLKWILHDWNDEECVKILKNCKDAIANKGKKAKVIIIDMVVDKEKGNGESVETQLFFDMLMMVLASGKERTKKEWIKLISSAGFSDYKITPILGLRS 168
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme117070g00001 168 PANTHER O-METHYLTRANSFERASE 5 159 IPR016461 GO:0008168
Trme117070g00001 168 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 7 165 IPR029063 -
Trme117070g00001 168 Pfam O-methyltransferase domain 7 156 IPR001077 GO:0008171
Trme117070g00001 168 Gene3D Vaccinia Virus protein VP39 1 168 IPR029063 -
Trme117070g00001 168 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 168 IPR016461 GO:0008168
Trme117070g00001 168 CDD AdoMet_MTases 13 101 - -
Trme117070g00001 168 FunFam O-methyltransferase ZRP4 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme117070g00001 Trme-Chr117070 1 634 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme117070g00001 7 160 Monolignol Biosynthesis Gene Families AT1G51990 43.590 5.52e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme117070g00001 - K16040 gmx:100807238 279.256