Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1170377g00001 ATGGCAGGAGGCATGTCTGCTTTGATTACTATGCCGTTGGATACAATCAAGACAAGGCTGCAGGTCTTGGATGGCGATGAGAATGGCCGTCGTGGACCTACAGTTATGCAGACAGTTAGAAGTTTAGTTAAGGAAGGTGGTTGGACGGCTTGTTATAGAGGATTGGGACCTAGATGGGCTTCAATGTCAGTGTCTG 196 0.4796 MAGGMSALITMPLDTIKTRLQVLDGDENGRRGPTVMQTVRSLVKEGGWTACYRGLGPRWASMSVS 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1170377g00001 65 SUPERFAMILY Mitochondrial carrier 1 62 IPR023395 -
Trme1170377g00001 65 Gene3D Mitochondrial carrier domain 1 65 IPR023395 -
Trme1170377g00001 65 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 65 - -
Trme1170377g00001 65 Pfam Mitochondrial carrier protein 1 63 IPR018108 -
Trme1170377g00001 65 ProSiteProfiles Solute carrier (Solcar) repeat profile. 1 65 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1170377g00001 Trme-Chr1170377 19 214 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1170377g00001 1 65 Chloroplast and Mitochondria Gene Families AT1G72820 76.471 7.71e-31 108
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1170377g00001 K15121 - jre:109005308 129.028