Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11699g00001 CCTCCATCAATTGTTACAGATGAGATTTGCACTGCATGTGACTTTAACCGTCCAGGAAAGACTTGTCTACGCAAGCTTGAGTGGGTTTGGCGTGGATCAACATTCACGGCAAAGAAAAGTGACTATTATCATCTAAAGAAGCAAATTGAGTCAGAGTTTGTTGATGGGACAAATGAAAGGCATATAAACGGGTACTTGACAAGCCAGTTACCGAACTCCGTGAAGCTGGAATCTGCATGCGCGAAAATCCATTTTATGTTGACACTGTTCGCAGGTTTTGTCCTATCTGGTTCAAGTTTCCGGGATAGGAGATATGAATATAAAGGCCTTAACAAGGTTTGGAAGGGAAAACTATCAGAGGCCAAAGGCAGTGGAAATTCTATGAAGATCCAGGAAGCACAAGACATGGTAGTGCTTTATGATTCATTGCAACTTGCTCACAAGTGTATTCTTAATTCCTTTTATGGATACGTAATGCGCAAGGGTGCAAGATGGTACTCCATGGAAATGGCTGGTGTTGTCACATATACTGGTGCAAAAATAATTCAAAATGCTCGCTTGCTGGTAGAGAAAATAGGAAAACCACTTGAACTTGACACCGATGGTATCTGGTGTGCACTTCCTGGATCGTTTCCAGAAAATTTCACTTTTAAAACAAT 659 0.4127 PPSIVTDEICTACDFNRPGKTCLRKLEWVWRGSTFTAKKSDYYHLKKQIESEFVDGTNERHINGYLTSQLPNSVKLESACAKIHFMLTLFAGFVLSGSSFRDRRYEYKGLNKVWKGKLSEAKGSGNSMKIQEAQDMVVLYDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCALPGSFPENFTFKT 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11699g00001 219 Gene3D Palm domain of DNA polymerase 122 219 IPR023211 -
Trme11699g00001 219 FunFam DNA polymerase epsilon catalytic subunit A 104 165 - -
Trme11699g00001 219 SUPERFAMILY DNA/RNA polymerases 97 213 IPR043502 -
Trme11699g00001 219 PANTHER DNA POLYMERASE EPSILON CATALYTIC SUBUNIT A 1 60 IPR029703 GO:0003677|GO:0003887|GO:0006260|GO:0006281|GO:0008622
Trme11699g00001 219 Pfam DNA polymerase family B 126 192 IPR006134 GO:0000166|GO:0003677
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11699g00001 1 219 Core DNA Replication Machinery Family AT1G08260 73.333 2.23e-110 345
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11699g00001 K02324 - mnt:21392351 351.288