Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116932g00001 CGAGGTGAAAATGTTACGGTGGATCCAACCTTAGTTTTCTCAAACAACCGCATCAAAAACGCTTACGTGGCGTTACAAGCTTGGAAACAAGCTATTCTTTCTGATCCAAATAACTGCACTGTTAATTGGGTAGGTTCCAATGTATGCAACTACACAAATGTTTTCTGTGCACCCGCATTGGATAACCCTAAAATCAAAACCGTCGCCGGAATCGATCTAAATCACTGTGATATCGCCGGTTATTTACCGGAAGAGCTTGGTCTTTTAACCGATCTTGCTCTTTTTCATGTCAATACTAATCGATTCTGTGGAACGGTTCCTCATAAGTTTGAGAAGCTGAAAATCTTGTTTGAGTTGGATCTGAGTAATAACCGTTTCGCCGGTAAGTTTCCGGAAGTTGTTCTCCGGTTGCCGGAGTTGAAGTTTTTAGATCTGAGGTTTAATGAATTTGAAGGAACGGTACCGAAAGAGCTTTTTGATAAAGATTTGGATGCGATTTTCATCAATCATAATCGATTTGTTTTCGATTTACCGGATAATTTCGGTAATTCACCGGTTTCGGTTATTGTTCTGGCGAATAACCGTTTTCACGGTTGTTTTCCGGCGGGGATTGGTAACATGACGAATTTGAATGA 635 0.4063 RGENVTVDPTLVFSNNRIKNAYVALQAWKQAILSDPNNCTVNWVGSNVCNYTNVFCAPALDNPKIKTVAGIDLNHCDIAGYLPEELGLLTDLALFHVNTNRFCGTVPHKFEKLKILFELDLSNNRFAGKFPEVVLRLPELKFLDLRFNEFEGTVPKELFDKDLDAIFINHNRFVFDLPDNFGNSPVSVIVLANNRFHGCFPAGIGNMTNLN 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116932g00001 211 Gene3D Ribonuclease Inhibitor 133 211 IPR032675 -
Trme116932g00001 211 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 6 211 - -
Trme116932g00001 211 SUPERFAMILY L domain-like 22 210 - -
Trme116932g00001 211 Pfam Leucine rich repeat 95 149 IPR001611 GO:0005515
Trme116932g00001 211 Gene3D Ribonuclease Inhibitor 20 132 IPR032675 -
Trme116932g00001 211 FunFam Leucine-rich repeat extensin-like protein 1 22 183 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116932g00001 Trme-Chr116932 1 635 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116932g00001 1 211 Leucine-rich Repeat extension Gene Families AT3G24480 82.464 6.55e-127 365
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116932g00001 - - ccaj:109813452 394.045