Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11679g00001 ATGGAGCGACCTGGGAGCTTCAACGACGGTCAACATATTATAGAAATAGCCGGGAATGTCGAGGCTTCTACATCCGCATCGTCTCGTGATAGGCATTTTGATGGTGTAGACACGGTGCGTGTAGAAAGAATAGGTGGTGTGCAGTTGTCTGGTGGTCAGCCTTCGGTTTCAACCTCAGGCGTATCAATTGGATCAAATAGTAGGAATTCTTCGTTTGTAAGACGGGGGGATGCTCGTCGGAGTAGGAGTCCCGTTCATTCTGGATTATGGATATCTATTGAGCTAGTCCTGTTAGTAAGCCAGATTGTTGCGTCTGTCGTTGTTTTGTCATTGTCAAGGCATGAGCATCCGCATACGCCATTGTTTCAATGGATAGTGGGCTATGCTTCTGGATGTGTTGCTACACTTCCTCTTCTTTTTTGGCGGTATTATAATCATAACCATATGCGAGAACAAGATACAACTCAGTCACGTCAAACATCTCCTCGGGTTAGTGATCCTTCTGGGACACATCTGTCCATTTCC 525 0.461 MERPGSFNDGQHIIEIAGNVEASTSASSRDRHFDGVDTVRVERIGGVQLSGGQPSVSTSGVSIGSNSRNSSFVRRGDARRSRSPVHSGLWISIELVLLVSQIVASVVVLSLSRHEHPHTPLFQWIVGYASGCVATLPLLFWRYYNHNHMREQDTTQSRQTSPRVSDPSGTHLSIS 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11679g00001 175 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 1 160 - -
Trme11679g00001 175 MobiDBLite consensus disorder prediction 50 72 - -
Trme11679g00001 175 MobiDBLite consensus disorder prediction 151 175 - -
Trme11679g00001 175 MobiDBLite consensus disorder prediction 154 175 - -
Trme11679g00001 175 MobiDBLite consensus disorder prediction 50 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11679g00001 Trme-Chr11679 1117 1641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11679g00001 74 175 C3H Transcription Factor Family AT1G80400 50.476 4.36e-32 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11679g00001 - - gmx:100778728 260.381