Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11671g00001 ACTTTTACAATGTGGGGTCCGGCCAATTCTTTGTCTGAAGAAAATGTAGCAAAGGAGCAACAAGGACTAACACCCCGAGTTTTTGAGCGACTATTTGCGCGTATAAATGAAGAGCAAATTAAGAACTCTGATCAACAGCTCAATTATCAGTGCCACTGCTCTTTTCTCGAGATATACAATGAGCAAATCACAGATCTGTTTGATCCAAATCAAAAGAACCTTCAGATTAGAGAAGATGTCAAATCAGGTGTCTATGTTGAAAATCTTACAGAGGAGCAGGTGTCTACAATGAAGGATGTTACTGAGCTTTTACTGAAGAGTGCAGCAGATGGTGTGAGCAGATTAAAAACAAGTAGAATCAATCTTGTTGATCTGGCTGGGTCAGAACGACAAAAATCAACAGGTGCTGCCGGAGAGCGTTTGAAGGAGGCTGGCAATATTAATAGATCACTCTCACAGCTTGGGTATGGTTTAGCATACATGTGTATTACATTCAGAGATATAGATAATTACATAAAATGA 522 0.3946 TFTMWGPANSLSEENVAKEQQGLTPRVFERLFARINEEQIKNSDQQLNYQCHCSFLEIYNEQITDLFDPNQKNLQIREDVKSGVYVENLTEEQVSTMKDVTELLLKSAADGVSRLKTSRINLVDLAGSERQKSTGAAGERLKEAGNINRSLSQLGYGLAYMCITFRDIDNYIK 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11671g00001 173 Gene3D Kinesin motor domain 1 108 IPR036961 -
Trme11671g00001 173 Gene3D Kinesin motor domain 109 163 IPR036961 -
Trme11671g00001 173 SMART kinesin_4 1 171 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme11671g00001 173 ProSitePatterns Kinesin motor domain signature. 118 129 IPR019821 GO:0003777|GO:0005524|GO:0007018
Trme11671g00001 173 Pfam Kinesin motor domain 1 107 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme11671g00001 173 Pfam Kinesin motor domain 114 156 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme11671g00001 173 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 156 IPR027417 -
Trme11671g00001 173 ProSiteProfiles Kinesin motor domain profile. 1 173 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Trme11671g00001 173 PANTHER KINESIN-LIKE PROTEIN KIN-12D 109 155 IPR044986 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11671g00001 Trme-Chr11671 1 1473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11671g00001 1 155 Calmodulin-binding Proteins AT5G65930 30.481 4.61e-16 73.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11671g00001 K10400 - tcc:18602601 250.366