Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11670g00001 ATGGCTGTTCATACAAAATATCGTCTCATTACTTACTCACAAGAGATTGTAGATGGGCAGCCTATTTTTGTTTCGTCGAATTGTCTACCGGCTAAGGCGTTGAAATATGAGCCGGCAGGTCATTCTTTTCATTCTGCCGCACTTAAACTCATGGGTGTTAAAGAAGAAAAAGATAACAAAGATGATAGTAATAATAATAATAAGAAAGTGGTAGGTGATAAGGAAGAGGCTTATTTGCCATCTGATTCTTATAGCAGCAAGAGCAAAAAGAAATCTGGGGATGGAGACAAACAACAGGATCACTATGCATTATTAGGGTTGAGCCATCTTAGGTTTCTTGCTACTGAAGATCAAATTCGTAAAAGCTATCGTGAAACTGCCTTGAGGTTTCATCCGGACAAACAAGCTGCTCTTATTCTTGCTGAGGAAACTGAGGTTGCCAAGGAGGCGAAGAAGGTTGAAATAGATACTCATTTCAAGGCAATCCAGGAGGCATATGCAGTGTTGACTGATCCCACAAAGAGAAGAATTTATGATTCTACCGATGAGTTTGATGATGAGATTCCCACCGACTGTGCTCCACAAGACTTCTTCAAGGTGTTTGGTCCAGCTTTTATGAGGAATGGGCGGTGGTCCGTTAATCAACCAATTCCATCACTGGGTGATGATAAGACTTCAATAAAGGAAGTTGACAATTTCTATGATTTTTGGTATTCCTTTAAAAGCTGGAGGGAGTTTCCCCAGGCTGATGAGCATGATATTGAACAAGCTGATAATCGAGAAGATAAAAGGTGGATGGAAAGGCAGAATGCAAAACTGTCAGAAAAAGCCAGGAAGGAAGAGTATACACGGATCCGCACTCTTGTTGATAATGCTTATAAGAGGGACCCTAGAATATTGAGAAGAAAGG 910 0.4066 MAVHTKYRLITYSQEIVDGQPIFVSSNCLPAKALKYEPAGHSFHSAALKLMGVKEEKDNKDDSNNNNKKVVGDKEEAYLPSDSYSSKSKKKSGDGDKQQDHYALLGLSHLRFLATEDQIRKSYRETALRFHPDKQAALILAEETEVAKEAKKVEIDTHFKAIQEAYAVLTDPTKRRIYDSTDEFDDEIPTDCAPQDFFKVFGPAFMRNGRWSVNQPIPSLGDDKTSIKEVDNFYDFWYSFKSWREFPQADEHDIEQADNREDKRWMERQNAKLSEKARKEEYTRIRTLVDNAYKRDPRILRRK 303
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11670g00001 303 Pfam DnaJ domain 100 179 IPR001623 -
Trme11670g00001 303 CDD DnaJ 100 171 IPR001623 -
Trme11670g00001 303 MobiDBLite consensus disorder prediction 54 76 - -
Trme11670g00001 303 PRINTS DnaJ domain signature 105 123 IPR001623 -
Trme11670g00001 303 PRINTS DnaJ domain signature 123 138 IPR001623 -
Trme11670g00001 303 PRINTS DnaJ domain signature 154 174 IPR001623 -
Trme11670g00001 303 MobiDBLite consensus disorder prediction 54 98 - -
Trme11670g00001 303 SUPERFAMILY Chaperone J-domain 60 178 IPR036869 -
Trme11670g00001 303 Gene3D DnaJ domain 83 193 IPR036869 -
Trme11670g00001 303 SMART dnaj_3 99 174 IPR001623 -
Trme11670g00001 303 PANTHER DNAJ HOMOLOG SUBFAMILY C MEMBER 2 1 303 IPR044634 GO:0006450|GO:0030544|GO:0043022|GO:0051083
Trme11670g00001 303 ProSitePatterns Nt-dnaJ domain signature. 159 178 IPR018253 -
Trme11670g00001 303 ProSiteProfiles dnaJ domain profile. 100 182 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11670g00001 Trme-Chr11670 732 1641 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11670g00001 101 300 C2H2 Transcription Factor Family AT1G74250 28.512 1.89e-17 80.9