Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11667g00001 GAGGACCCTAACATAACTTTAGCTTCAAAGCCACAGCTACAGAAAAGAGTATGTAATTGCAATAAATCAGGTTGCCAGAGGAAATATTGCGCATGCTTTAAGGACGGTGTTGGTTGCTCTCCAATTTGTAAATGTCAAGGGTGCAAAAATATACATGGTAGAAAGAATAGTACAGCTGAAACAAAATCTGAGCTTGAAGAAACAAAAACATTACAAATTTCCAGAACATTGCCTCCATTACCATATTCATCGATGGGAAAGCCGCCTCAAATATCGTGTTCTGATTTGTTCGGCAGCCAAAACCAAGAGCTTGTGGAATCAAATGCTACAGGATCAATAACTATTCCAGATGATGTAAATTGCATCAATACTTCTTCTATTGGCAAGTGGATATGCATTTCTAATCCTGAATGCGAAAATGGCGTTGAATCATCTCCTACTCGAAGTGGTGGCCAGAACTCGACATTAGAATGA 474 0.3903 EDPNITLASKPQLQKRVCNCNKSGCQRKYCACFKDGVGCSPICKCQGCKNIHGRKNSTAETKSELEETKTLQISRTLPPLPYSSMGKPPQISCSDLFGSQNQELVESNATGSITIPDDVNCINTSSIGKWICISNPECENGVESSPTRSGGQNSTLE 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11667g00001 157 MobiDBLite consensus disorder prediction 138 157 - -
Trme11667g00001 157 ProSiteProfiles CRC domain profile. 1 53 IPR005172 -
Trme11667g00001 157 MobiDBLite consensus disorder prediction 137 157 - -
Trme11667g00001 157 Pfam Tesmin/TSO1-like CXC domain, cysteine-rich domain 16 50 IPR005172 -
Trme11667g00001 157 PANTHER PROTEIN TESMIN/TSO1-LIKE CXC 2 5 70 IPR044522 GO:0003700
Trme11667g00001 157 SMART CXC_2 13 54 IPR033467 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11667g00001 Trme-Chr11667 193 822 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11667g00001 1 68 CPP Transcription Factor Family AT3G22760 50.000 1.54e-13 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CPP Trme11667g00001 TCR 2.1e-10 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11667g00001 - - tpra:123897031 305.449