Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116662g00001 ACAATTCCTATCCATAGTGTTGCTTCTGGTGTTGGAACTTTTGAAGGAGTTGTAACTGAGATTATCATAACATTTGGATTGGTGTACACAGTGTATGCCACAGCAGCTGATCCTAAGAAAGGGTCATTAGGGACAATTGCACCAATTGCTATTGGTTTCATTGTTGGTGCAAATATCTTAGCTGCAGGGCCATTCTCTGGTGGATCAATGAATCCAGCACGTTCATTTGGGCCTGCAGTTGTTAGTGGTGATTACCATGACAATTGGATCTATTGGGTTGGACCTCTTATTGGTGGTGGTTTGGCTGGTGTTATTTATGGCTATGTCTTTATGCCCTCAGATCATGTACCTTTGAGGAGTGATTTCTGA 369 0.4228 TIPIHSVASGVGTFEGVVTEIIITFGLVYTVYATAADPKKGSLGTIAPIAIGFIVGANILAAGPFSGGSMNPARSFGPAVVSGDYHDNWIYWVGPLIGGGLAGVIYGYVFMPSDHVPLRSDF 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116662g00001 122 PANTHER AQUAPORIN-8 2 113 IPR034294 -
Trme116662g00001 122 Gene3D Glycerol uptake facilitator protein. 1 120 IPR023271 -
Trme116662g00001 122 SUPERFAMILY Aquaporin-like 3 117 IPR023271 -
Trme116662g00001 122 Pfam Major intrinsic protein 6 106 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme116662g00001 122 PRINTS Major intrinsic protein family signature 52 74 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme116662g00001 122 PRINTS Major intrinsic protein family signature 89 109 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme116662g00001 122 PRINTS Major intrinsic protein family signature 19 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116662g00001 Trme-Chr116662 195 563 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116662g00001 2 122 Major Intrinsic Protein MIP AT3G16240 80.488 6.72e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116662g00001 K09873 - gmx:100306092 227.254