Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116652g00001 ACGCAATTGGAACGTCATGAGAACATGATTCTTAGGCAGGAAAATGAGAAGCTCCGAGCTGAGAACAGTGTGATGAAGGAAGCCATGGCAAATCCAATATGCAGCAACTGTGGCGGCCCGGCAATTCCTGGACAAATTTCAATGGAGGAACACCAGATTAGAATTGAGAATGCTCGACTGAAGGAGGAATTGGCTCGAGTGTGTACCTTGTCCAACAAGTTCCTCGGCCGTCCAGTCTCTGCATTGACTGGAATGTCTATGCAGAATCCGAATGCAGGTCTTGAATTTGGTATGGGAAGGAACGGAATTGTTGGTCCGAGCAATTTCAACATGTCGCTGCCACCAATGGGATTTGATATGGGAGATGGAGTTATGGGAGCTCCACCACCAAATTCTGTAATGCGATCACCGATGGGAATGATTGGAAATGATGCCCAGCAGGAGAGAGCTATGCTTATCGAACTCGCATTAGCTGCTATGGATGAACTAATCAAAATGTCCGAACCTGACTCCCACCTCTGGATTAAGAGTCCAGACAACGGGAAGGAAATGCTGAACCATGACGAGTATGCGAGGATC 579 0.475 TQLERHENMILRQENEKLRAENSVMKEAMANPICSNCGGPAIPGQISMEEHQIRIENARLKEELARVCTLSNKFLGRPVSALTGMSMQNPNAGLEFGMGRNGIVGPSNFNMSLPPMGFDMGDGVMGAPPPNSVMRSPMGMIGNDAQQERAMLIELALAAMDELIKMSEPDSHLWIKSPDNGKEMLNHDEYARI 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116652g00001 193 Coils Coil 3 31 - -
Trme116652g00001 193 ProSiteProfiles START domain profile. 145 193 IPR002913 GO:0008289
Trme116652g00001 193 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 193 IPR042160 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116652g00001 Trme-Chr116652 58 636 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116652g00001 1 193 Homeobox Transcription Factor Family AT4G00730 47.150 3.60e-48 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116652g00001 K09338 - gmx:100820113 278.485