Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116559g00001 ATGATGGAAGATGGTGACGAAACCGAGATTGGAGAGCGTGGTATTAACCTCAGCGGCGGCCAGAAACAACGTGTACAACTTGCTAGAGCTGTATATCAAGACACTGACATCTATCTCCTTGATGATGTATTCAGTGCTGTTGATGCTCAAACAGGATCATTTATTTTTAAG 171 0.4269 MMEDGDETEIGERGINLSGGQKQRVQLARAVYQDTDIYLLDDVFSAVDAQTGSFIFK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116559g00001 57 Gene3D - 1 57 IPR027417 -
Trme116559g00001 57 Pfam ABC transporter 5 43 IPR003439 GO:0005524
Trme116559g00001 57 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 57 - -
Trme116559g00001 57 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 56 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116559g00001 Trme-Chr116559 223 393 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116559g00001 2 55 Calmodulin-binding Proteins AT2G36910 46.296 4.96e-13 59.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116559g00001 - K05665 vra:106762025 107.457