Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116490g00001 GCGCTTCGTCCTGGTGGACCTCCGTTTCTCCGCCTCACCGGCATTGGTCCGCCGTCGCATGATAACCGTGACAACCTCCGTGAAATTGGACTCCGTCTTGCCGAACTAGCTCGCTCCGTCAACGTTAGATTCGCTTTCCGTGGAGTCGCGGCGTGGCGGCTTGAAGATGTGAAGCCGTGGATGCTTCAGGTAAGTTCTAAAGAAGCCGTAGCGGTTAATTCTATTATGCAGCTTCATCGTCTTCTTGGATCTGAACCCGACCCGAATAATCCTTCCGCTATTGAAACGGTTTTGGGTTGGATCCGAAGTTTGAACCCGAAAATTATGACGGTTGTGGAACAAGAAGCGAATCATAACGAAGATGGGTTTATGGACCGGTTCACGGAAGCATTACATTATTACTCAACCGTTTTTGACTCGCTGGAAGCATGTCCGGTTGAACCGGATAAAGCAATGGCTGAGTTTTATTTGCAGAGGGAGATTTGCAACGTGGTGTGTTGTGAAGGACCGGCTCGAGTGGAGAGACATGAACCGCTTGTTAAGTGGAGGGAACGGCTCGGGAAAACCGGGTTCAGACCGTTACATTTGGGTTCGAATGCTTTTAAACAAGCTAGTATGTTGTTGACTCTGTTTTC 635 0.4945 ALRPGGPPFLRLTGIGPPSHDNRDNLREIGLRLAELARSVNVRFAFRGVAAWRLEDVKPWMLQVSSKEAVAVNSIMQLHRLLGSEPDPNNPSAIETVLGWIRSLNPKIMTVVEQEANHNEDGFMDRFTEALHYYSTVFDSLEACPVEPDKAMAEFYLQREICNVVCCEGPARVERHEPLVKWRERLGKTGFRPLHLGSNAFKQASMLLTLFS 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116490g00001 212 Pfam GRAS domain family 1 211 IPR005202 -
Trme116490g00001 212 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 1 208 IPR005202 -
Trme116490g00001 212 ProSiteProfiles GRAS family profile. 1 212 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116490g00001 Trme-Chr116490 3 637 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116490g00001 1 212 GRAS Transcription Factor Family AT1G14920 57.944 7.95e-84 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme116490g00001 GRAS 1.3e-70 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116490g00001 K14494 - gmx:100805968 376.711