Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116450g00001 ATGTGTTTTGGTGACAAACTAGATGAGAATCAAATAAGAGAAATTGAGGAAAGTCAACGCATTATGCTTCTTAACTTTTCTAGATACAATGTCTTGAATTTTTGGCCAACAATTACAAAGATATTGTTTAGGAATCGATGGAAGGAGTTTTTGAATCTAAGACGTGATCAAGAAGCCGTGTTGATTCCTTATATAAACGCTCGAAGGAAAATCAAAGAAGAGAGATTAAGAAAAGGYGRAGAGAACAATGWKAATGASTCAAATGATRAATTTGTTTTGTCATATGTTGATACTTTATTGGACTTGGAGTTTTTGGAGGAAGAGAAMAMGACCAAACTTGATGATGGTAAAATTTGCACATTATGTTCGGAGTTTCTAAATGCGGGAACAGATACTACTTCAACTGCATTGGAATGGATCATGGCGAATTTGGTGAAGTACCAAGACATACAAGAAAAGCTTGTAGAAGAGATTAAAGGGGTGATTGGTGATAATAAAGAAGAGAAGGAAATTGTAGAAGAAGATTTGAAAAAAATGCCATATCTTAAAGCTGTAATTTTGGAAGGGTTAAGGCGTCATCCACCGCTACACTA 593 0.3423 MCFGDKLDENQIREIEESQRIMLLNFSRYNVLNFWPTITKILFRNRWKEFLNLRRDQEAVLIPYINARRKIKEERLRKGXENNXNXSNDXFVLSYVDTLLDLEFLEEEXXTKLDDGKICTLCSEFLNAGTDTTSTALEWIMANLVKYQDIQEKLVEEIKGVIGDNKEEKEIVEEDLKKMPYLKAVILEGLRRHPPLH 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116450g00001 197 PRINTS P450 superfamily signature 184 195 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 PRINTS P450 superfamily signature 128 145 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 Pfam Cytochrome P450 3 197 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 PANTHER FLAVONOID 3'-MONOOXYGENASE-RELATED 1 197 - -
Trme116450g00001 197 Gene3D Cytochrome P450 1 197 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 PRINTS E-class P450 group I signature 137 163 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 PRINTS E-class P450 group I signature 183 197 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 PRINTS E-class P450 group I signature 117 134 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme116450g00001 197 SUPERFAMILY Cytochrome P450 2 196 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116450g00001 Trme-Chr116450 1 593 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116450g00001 1 197 Cytochrome P450 AT1G64940 56.853 3.73e-74 230
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116450g00001 K24184 - gmx:100816275 259.225