Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11632g00001 ATGAACAAACAACCTACAAAAAGTCTTGAAACAGTGATTGACATAAAAAATAAGCCTGTGAGTTTCACTGGAGGACTTGAATTTGAATCTCTTACTTACACAGTCATAAAAGATAAGAAAATCGATGGAAAATGGTCGAAAGAAGACGTTGATTTGTTGCATGATATAACTGGTTATGCACCAAAGGGTAGTATCACTGCAGTTATGGGACCAAGTGGTGCTGGAAAATCAACTTTGTTGGATGGACTTGCTGGAAGAATTGCAAGTGGAAGTCTTAAAGGGAAAGTTTCATTGGATGGAAATAGTGTGAATGCAAGTTTGATTAAAAGAACTTCTGCTTATATTATGCAAGAAGATAGGCTTTTTCCTATGCTTACTGTTTATGAGACTTTGATGTTTGCTGCTGACTTCAGATTAGGGCCACTTTCAGTTGTTGATAAGATGCAGAGAGTTGAGAANCTTATTGAACAGCTTGGATTATCTGTGTTCGGTGTCCGACACTGA 504 0.373 MNKQPTKSLETVIDIKNKPVSFTGGLEFESLTYTVIKDKKIDGKWSKEDVDLLHDITGYAPKGSITAVMGPSGAGKSTLLDGLAGRIASGSLKGKVSLDGNSVNASLIKRTSAYIMQEDRLFPMLTVYETLMFAADFRLGPLSVVDKMQRVEXLIEQLGLSVFGVRH 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11632g00001 167 Gene3D - 26 166 IPR027417 -
Trme11632g00001 167 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 162 IPR027417 -
Trme11632g00001 167 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 20 161 - -
Trme11632g00001 167 Pfam ABC transporter 53 161 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11632g00001 Trme-Chr11632 469 1074 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11632g00001 39 133 Calmodulin-binding Proteins AT2G36910 33.333 1.93e-06 45.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11632g00001 K05681 - gmx:100804809 255.758