Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1163104g00001 GATGAGAACACCATCTGTGTTGCCGCCATTTTGGGTTCAACGCTGACCGGAGAGTTTGAGGATGTGAAGCTTCTTAACGAACTTCTTACTATAAAGAACAAGGAAACAGGATGGGATACACCAATTCATGTAGATGCGGCGAGTGGCGGTTTTGTTGCTCCATTTCTCTACCCTGATCTCGAATGGGATTTTCGTTTACCGTGGGTGAAGAGT 213 0.4601 DENTICVAAILGSTLTGEFEDVKLLNELLTIKNKETGWDTPIHVDAASGGFVAPFLYPDLEWDFRLPWVKS 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1163104g00001 71 Pfam Pyridoxal-dependent decarboxylase conserved domain 4 71 IPR002129 GO:0016830|GO:0019752|GO:0030170
Trme1163104g00001 71 SUPERFAMILY PLP-dependent transferases 1 71 IPR015424 -
Trme1163104g00001 71 PANTHER GLUTAMATE DECARBOXYLASE 1 71 IPR010107 GO:0004351|GO:0006536|GO:0030170
Trme1163104g00001 71 Gene3D - 1 71 IPR015421 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1163104g00001 Trme-Chr1163104 1 213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1163104g00001 1 71 Calmodulin-binding Proteins AT3G17760 90.141 1.23e-42 142