Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116250g00001 ATGGGAGAAGAAACCACCGAATCAAGAAAACAAGCAAGGCTAGCAATTCTAGAACTAGCAAACATGATAAGTGTTCCTATGTCCTTAAACGCCGTCGTACGTCTCAATGTTGCTGACGCAATTTGGGAAGGTGGTTCTAACGCGCCTCTCACTGCTGCTCAGATCCTCGCGCGTGTAATTCCTGACGGTGGCGGTGATGCCGAGAATCTTCAGCGCGTGCTTC 223 0.4978 MGEETTESRKQARLAILELANMISVPMSLNAVVRLNVADAIWEGGSNAPLTAAQILARVIPDGGGDAENLQRVL 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116250g00001 74 Coils Coil 67 74 - -
Trme116250g00001 74 Gene3D - 1 74 IPR036388 -
Trme116250g00001 74 SUPERFAMILY "Winged helix" DNA-binding domain 8 74 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116250g00001 Trme-Chr116250 8 230 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116250g00001 1 74 Monolignol Biosynthesis Gene Families AT3G53140 66.667 2.89e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116250g00001 - - zju:107432041 119.783