Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116084g00001 GGTGGTTCTTCTGGGTCAGAGGAATGGACAGAACATGCAACATTTGTGTTGTTAGAGATTTGGGGTGAAAAGTTTCTTCAACTTGGAAGAAACAGTTTGAGATCAGAGGAATGGCATGAAGTATCTGAGAAAGTTTCTGAAGAATTGAAAATTGAAAGGAGTGTTGAACAATGTAGAAGTGTATTGGATAAAGTGAAAAGAAGGTATAAGAAAGAGAAGAGTAGAATGGATGAAATGGGTTTGGGTGTAAATTCTTGTAAGTGGCCATTTTTCAAGAGGATGGATATGTTGATGTCTTCGAGTGCGAGACAAGAGTATGGACTTGCTTGCGGTGTTGATTCGGGGGAATATGTGTTTATGAATACACGAGTTTATTTGAATAGGTCGAATGGTTTTGATGAGATGAGGGATAGTCCNNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNNNNANNNNNNNTGATGATGATGATTTCGATGAGGTTGATAAGGAAGAGGAGGAAGCTTCTTATAGGGTTTTGGCTGATTCTATTCAGAAGTTTGGGAAGATATATGAGAAGATTGAGAATACTAAGAGGCAACAGATGATGGAGTTGGAGAAGATGAGGTTGGATTTTAATAGGGAATTGG 637 0.3548 GGSSGSEEWTEHATFVLLEIWGEKFLQLGRNSLRSEEWHEVSEKVSEELKIERSVEQCRSVLDKVKRRYKKEKSRMDEMGLGVNSCKWPFFKRMDMLMSSSARQEYGLACGVDSGEYVFMNTRVYLNRSNGFDEMRDSPXXXXXXXXXXXXXXXXXDDDDFDEVDKEEEEASYRVLADSIQKFGKIYEKIENTKRQQMMELEKMRLDFNREL 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116084g00001 212 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 4 212 IPR044823 -
Trme116084g00001 212 Pfam Myb/SANT-like DNA-binding domain 7 96 IPR044822 -
Trme116084g00001 212 Coils Coil 187 207 - -
Trme116084g00001 212 Gene3D - 9 71 - -
Trme116084g00001 212 MobiDBLite consensus disorder prediction 137 160 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116084g00001 Trme-Chr116084 2 638 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116084g00001 2 103 Trihelix Transcription Factor Family AT3G14180 39.623 1.49e-18 81.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme116084g00001 Myb_DNA-bind_4 3.5e-19 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116084g00001 - - vum:124831447 319.701