Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116075g00001 ATGTACAATGGTGTTGTAGGGTTGCAGGAAGCACAGAAAAATCTACCACAAATTTGTACTAATCACCTTGATCCTACCTCGTGCTTCTTCCCTCAGAATTTGATTGCCAGTGTTAGAACACCGCTTTTTCTTCTTAATACAGCTTATGATTCATGGCAG 159 0.4025 MYNGVVGLQEAQKNLPQICTNHLDPTSCFFPQNLIASVRTPLFLLNTAYDSWQ 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116075g00001 53 PANTHER NOTUM-RELATED 1 53 IPR004963 GO:0016787
Trme116075g00001 53 Pfam Pectinacetylesterase 1 53 IPR004963 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116075g00001 Trme-Chr116075 13 402 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116075g00001 1 53 Carbohydrate Esterase AT3G05910 71.698 3.01e-25 92.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116075g00001 K19882 - gmx:100782401 103.605