Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1160386g00001 ATGGTGGGTGTACAAGGTTTGAGTGCTGTTGTGGCTAGTGGAGTTTCTGCTATTGTGACAATGCCTTTTGATACAATTAAGACTAGGTTGCAGGTTTTGGATACAGAGGAGAATGGTAGAAGGAGGCCATTAACTTTTGTGCAAACTGTTAGGAATTTGGTGAATGAAGGT 171 0.4152 MVGVQGLSAVVASGVSAIVTMPFDTIKTRLQVLDTEENGRRRPLTFVQTVRNLVNEG 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1160386g00001 57 SUPERFAMILY Mitochondrial carrier 5 56 IPR023395 -
Trme1160386g00001 57 Gene3D Mitochondrial carrier domain 2 57 IPR023395 -
Trme1160386g00001 57 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN J 1 56 - -
Trme1160386g00001 57 Pfam Mitochondrial carrier protein 6 55 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1160386g00001 Trme-Chr1160386 1 171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1160386g00001 4 57 Chloroplast and Mitochondria Gene Families AT5G26200 70.370 3.26e-21 82.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1160386g00001 K15121 - gmx:100784202 87.4261