Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme116012g00001 ATGAATCCTGCATGTGCTTTTGGTTCTGCTTCCATTGCTGGAACATTTAGGAATCAAGCTGTTTATTGGGTTGGTCCTTTGGTTGGTGCTGCTGTTGCTGGTCTTCTTTATGATAATGTGTTGTTTCCTTCTCAGAATTCAGATGAAAATGTTAGGGTGTAA 162 0.4012 MNPACAFGSASIAGTFRNQAVYWVGPLVGAAVAGLLYDNVLFPSQNSDENVRV 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme116012g00001 53 PANTHER AQUAPORIN-8 1 43 IPR034294 -
Trme116012g00001 53 Gene3D Glycerol uptake facilitator protein. 1 53 IPR023271 -
Trme116012g00001 53 Pfam Major intrinsic protein 1 37 IPR000425 GO:0015267|GO:0016020|GO:0055085
Trme116012g00001 53 SUPERFAMILY Aquaporin-like 1 48 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme116012g00001 Trme-Chr116012 395 556 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme116012g00001 1 46 Major Intrinsic Protein MIP AT3G47440 67.391 2.81e-18 72.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme116012g00001 K09873 - qsa:O6P43_029843 91.6633