Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1159051g00001 TACCTCTCCGGCGCGATCATCGGAGGTGTTAAGGGAACCGTAGAAGGTCTCAAGGCTGCTGAGTCCGGTGAGTCTCTTAAGCTCCGAGTCAACCGTGTTCTTAACTCGGGTGGTCAAGGAGGTCGTAGACTCGGTAACTCGCTTGGCGTGTTGGGATTGATCTTTGCGGGATTGGAGAGTG 181 0.547 YLSGAIIGGVKGTVEGLKAAESGESLKLRVNRVLNSGGQGGRRLGNSLGVLGLIFAGLES 60
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1159051g00001 60 Pfam Tim17/Tim22/Tim23/Pmp24 family 1 59 - -
Trme1159051g00001 60 PANTHER TIM23 1 60 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1159051g00001 Trme-Chr1159051 35 215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1159051g00001 1 60 Chloroplast and Mitochondria Gene Families AT3G04800 58.333 1.74e-19 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1159051g00001 K17794 - qsa:O6P43_007618 101.679