Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1158159g00001 GATGAGGTGAAGCGTATGGTGGGGGAGTACTGGAAACCGGTTGTCCGTCTTGGTGGTGAGACGCTGACGATTTCTCAGGTGGCTGCCATTGCTGCACACGATGGTGCGACGGTGGAGTTGTCGGAATCTGCTAGAGCTGGCGTTAAGGCAAGCAGTGATTGGGTTATGGAGAGTATGAACAAAG 184 0.538 DEVKRMVGEYWKPVVRLGGETLTISQVAAIAAHDGATVELSESARAGVKASSDWVMESMNK 61
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1158159g00001 61 SUPERFAMILY L-aspartase-like 2 60 IPR008948 GO:0003824
Trme1158159g00001 61 Gene3D - 1 61 IPR024083 -
Trme1158159g00001 61 PANTHER HISTIDINE AMMONIA-LYASE 1 61 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1158159g00001 Trme-Chr1158159 30 213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1158159g00001 1 61 Monolignol Biosynthesis Gene Families AT2G37040 75.806 3.24e-24 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1158159g00001 K10775 - csav:115709282 105.916