Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1157965g00001 GATATCTATGATTTCCTGGTTGACATTGTTCCCCGTGACGACCTGAAAGATGAAGTGCTGGCTTCGATCCCAAGGGGAACAATGCATGTTGGTGGGCCTGCTGATGCTCTTCAATACTGCTACATGCCACCTCAGCAGCCTGAGCAGCCTCAGCAGCCTCATCCCTTCATGGCACCACAAATGTGGCCACAGCCTTCCGACCAGCGACCACCAT 214 0.5374 DIYDFLVDIVPRDDLKDEVLASIPRGTMHVGGPADALQYCYMPPQQPEQPQQPHPFMAPQMWPQPSDQRPP 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1157965g00001 71 MobiDBLite consensus disorder prediction 46 71 - -
Trme1157965g00001 71 MobiDBLite consensus disorder prediction 43 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1157965g00001 Trme-Chr1157965 2 215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1157965g00001 1 62 CCAAT-HAP5 Transcription Factor Family AT1G08970 44.595 1.91e-11 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1157965g00001 K08066 - gmx:100527803 105.145