Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1156375g00001 ATGATGGGAAGCCAAGCAACAGAGCAAGGAGATTACTCAAAATTCAAATCGAGAATTCCACACTGTTGCAAGAAAAATCCAACAGTAGTGGATAAGTTGTCAGGAACACCGTACAACCAGCAAGTACCCAATTGTTGCAAAGGTGGAGTCTTGAGTTCATTGGCTCAAGATCCAACCAACACAGTA 186 0.4247 MMGSQATEQGDYSKFKSRIPHCCKKNPTVVDKLSGTPYNQQVPNCCKGGVLSSLAQDPTNTV 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1156375g00001 62 PANTHER PROTEIN COBRA 1 62 IPR006918 GO:0010215|GO:0016020
Trme1156375g00001 62 Pfam COBRA-like protein 1 61 IPR006918 GO:0010215|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1156375g00001 Trme-Chr1156375 1 186 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1156375g00001 1 62 COBRA Gene Family AT3G29810 67.742 9.48e-27 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1156375g00001 - - gmx:100783820 110.153