Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1156301g00001 GCTATTCATGCTGCCAAAGAGAAAGAAAAGCTTGAGGGTGCTCTGAGTGGTTCCACACCTCCGTACCGAATCTTTACGTGGGATGACATAGTTTCAGCTACTTCGTCTTTCTCTGAAGATCTGAGAATCGGAATGGGTGCATATGGAGTAGTGTATAAGTGCACTTTGCATTACACAACTGTTGCTGTTAAAGTTCTTCACTCTAATGGAAAC 213 0.4319 AIHAAKEKEKLEGALSGSTPPYRIFTWDDIVSATSSFSEDLRIGMGAYGVVYKCTLHYTTVAVKVLHSNGN 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1156301g00001 71 SUPERFAMILY Protein kinase-like (PK-like) 18 68 IPR011009 -
Trme1156301g00001 71 ProSitePatterns Protein kinases ATP-binding region signature. 43 64 IPR017441 GO:0005524
Trme1156301g00001 71 PANTHER OS02G0152300 PROTEIN 4 70 - -
Trme1156301g00001 71 Gene3D Phosphorylase Kinase; domain 1 15 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1156301g00001 Trme-Chr1156301 3 215 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1156301g00001 6 71 U-box Gene Family AT4G25160 63.636 1.26e-23 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1156301g00001 - - gmx:100801699 114.775