Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1155636g00001 ATGAACTCCGTCACCGGAGCTCGACCTTCTCCGTCCACCGTACTCGAAGATGGTTGGTCCGAAGAAGCCACGTTCACACTCATCGACGCTTGGGGCAAACTTTACAAGAAGCTTAACCGCAAAAACTTCCGTCAGTATCACTGGAAGGAAATTGCGAAAGCCGTAAACGAACAC 174 0.5057 MNSVTGARPSPSTVLEDGWSEEATFTLIDAWGKLYKKLNRKNFRQYHWKEIAKAVNEH 58
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1155636g00001 58 Gene3D - 19 58 - -
Trme1155636g00001 58 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 13 58 IPR044823 -
Trme1155636g00001 58 Pfam Myb/SANT-like DNA-binding domain 17 57 IPR044822 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1155636g00001 5 56 Trihelix Transcription Factor Family AT3G14180 50.000 1.37e-12 58.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Trme1155636g00001 Myb_DNA-bind_4 1.4e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1155636g00001 - - tpra:123893969 115.546