Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1154787g00001 ATGACGGAGTATGTTGTCACTCGCTGGTATAGGGCACCGGAACTCCTACTTTGTTGTGACAACTATGGGACATCCATTGATGTATGGTCAATGGGATGCATCCTTGCTGAGCTTCTTGGACGAAAACCCATTTTCCCC 138 0.4783 MTEYVVTRWYRAPELLLCCDNYGTSIDVWSMGCILAELLGRKPIFP 46
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1154787g00001 46 Gene3D Transferase(Phosphotransferase) domain 1 1 46 - -
Trme1154787g00001 46 ProSiteProfiles Protein kinase domain profile. 1 46 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1154787g00001 46 Pfam Protein kinase domain 1 46 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme1154787g00001 46 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 1 46 - -
Trme1154787g00001 46 SUPERFAMILY Protein kinase-like (PK-like) 1 46 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1154787g00001 Trme-Chr1154787 1 138 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1154787g00001 1 46 MAP Kinase Gene Family AT1G59580 93.478 7.81e-30 104
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_MAPK Trme1154787g00001 Pkinase 4.1e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1154787g00001 K20535 - aof:109828929 100.523