Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1152990g00001 AACAATCTCCGATTCAGTTTCGGTCGTCAATCATCTCTCGATCCCATCCGTCGTAGTCCTGGTCAAGATGAAGCCGAACTCACCGTGCCCGAGAATCTCGATTCCACCATGCAACTTCTCTTTATGGCTTGTCGTGGTGATGTTCAAGGAGTGGAAGATTTGCTTAACGAAGGTATCGATGTTAATAGCATTGATCTCGATGGTCGTACTGCT 213 0.4695 NNLRFSFGRQSSLDPIRRSPGQDEAELTVPENLDSTMQLLFMACRGDVQGVEDLLNEGIDVNSIDLDGRTA 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1152990g00001 71 MobiDBLite consensus disorder prediction 1 17 - -
Trme1152990g00001 71 Gene3D - 29 71 IPR036770 -
Trme1152990g00001 71 MobiDBLite consensus disorder prediction 1 24 - -
Trme1152990g00001 71 SUPERFAMILY Ankyrin repeat 38 71 IPR036770 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1152990g00001 Trme-Chr1152990 1 213 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1152990g00001 1 71 MAP Kinase Kinase Kinase AT2G31800 80.556 4.59e-36 124
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1152990g00001 - - vum:124822479 134.035