Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme115266g00001 ATGTCCTGCCCTCATGTGTCTGGCATAGTAGGTCTTCTCAAAACACTTCATCCTGAATGGAGTCCAGCGGCTATCAAATCAGCGATTATGACCACCGCAAGCGAAGTGGACAACAGCAAAAGACCTATCCAGGATCGATTCTACGAAAATGCAACTCCATTTGCATATGGTTCGGGTCACATTCAACCTGATCTTGCTATAAACCCCGGACTGATTTATGATCTTAATGTG 231 0.4502 MSCPHVSGIVGLLKTLHPEWSPAAIKSAIMTTASEVDNSKRPIQDRFYENATPFAYGSGHIQPDLAINPGLIYDLNV 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme115266g00001 77 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 76 IPR045051 -
Trme115266g00001 77 ProSiteProfiles Serine proteases, subtilase domain profile. 1 67 - -
Trme115266g00001 77 SUPERFAMILY Subtilisin-like 1 71 IPR036852 GO:0004252|GO:0006508
Trme115266g00001 77 Gene3D Peptidase S8/S53 domain 1 76 IPR036852 GO:0004252|GO:0006508
Trme115266g00001 77 Pfam Subtilase family 1 57 IPR000209 GO:0006508|GO:0008236
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme115266g00001 Trme-Chr115266 44 506 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme115266g00001 1 75 Subtilisin-like Serine Gene Family AT5G59810 64.000 3.12e-32 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme115266g00001 - - tpra:123892266 127.487