Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11518g00001 ATGGAGGGAAGATCTCACACAAGTGGCCAATCTCTCTGTTGGGATCTACGTGACAAACCACAATATGCAGAGATTGAAAAGATTGCTGAAGAGATTATAAATATATTGGGTTACAAGTTTCCAAGTCTTCCAAAAGATTTGGTTGGAATTGTTTCCCTTGTAGAAGAATTAGAAAACCATTTACTTTTGGACTCGGTTGATGGTGTCCGGGTTGTAGGAATTTGTGGGATGGGTGGAATAGGGAAGACAACTCTAGCTACTGTTTTATACAACAAAATCTCTCATCAATTTCATGTGTGCTGCCTCATTGATGATCTAAGCAAAATTTATAGGCATGATGGTCTACTCGGTGCTCAAAAGCAAATTCTACATCAAACTCTAGGTGAAGAACGCCTTCAAACATGCAATCTTCACAACACATCTAACTTGATACAAAGTAGGCTACACAATGTAAAGTCCCTTATAATTCTTGACAATGTTGATCAAGTTGAACAACTCGAGAAATTAGCTGTGAGTCGTGAATGGTTAGGTGCAGGGAGTAGAATCATTATAGTTTCTAGAGATGAGCATATCTTGAAAGAGTATGGAGTGGATGTTGTTTACAAAGTTCCACTCTTGAATGAGACTGATTCTCTTCAATTGTTTAGTCAAAAAGCTTTCAAACTTGATCATGTTATGAGTAGTTATGATAAGTTGGCATTTGGCATACTATG 713 0.3745 MEGRSHTSGQSLCWDLRDKPQYAEIEKIAEEIINILGYKFPSLPKDLVGIVSLVEELENHLLLDSVDGVRVVGICGMGGIGKTTLATVLYNKISHQFHVCCLIDDLSKIYRHDGLLGAQKQILHQTLGEERLQTCNLHNTSNLIQSRLHNVKSLIILDNVDQVEQLEKLAVSREWLGAGSRIIIVSRDEHILKEYGVDVVYKVPLLNETDSLQLFSQKAFKLDHVMSSYDKLAFGIL 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11518g00001 237 Gene3D - 24 200 IPR027417 -
Trme11518g00001 237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 39 224 IPR027417 -
Trme11518g00001 237 PRINTS Disease resistance protein signature 147 161 - -
Trme11518g00001 237 PRINTS Disease resistance protein signature 71 86 - -
Trme11518g00001 237 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 225 IPR044974 GO:0006952
Trme11518g00001 237 Pfam NB-ARC domain 54 223 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11518g00001 Trme-Chr11518 342 1292 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11518g00001 48 216 WRKY Transcription Factor Family AT5G45050 34.706 5.88e-23 95.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11518g00001 - - tpra:123883787 317.775