Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme115087g00001 ATGATGGCAAAAACTAAAAGATATGAAGGATGTGGTGTGGGAATAGACCTTGGCACAACCTACTCTTGTGTTGCAGTGTGGGTGGATGAACATAATAGAGTAGAGATCATCCACAACGACCAAGGCAATAAAACCACTCCTTCTTTTGTTGCTTTTACTCACGAGCAAAGGTTGATCGGCGACGCTGCTAAAAACCAGGCTGCCGCCAACCCAGAAAACACTGTGTTTG 229 0.4498 MMAKTKRYEGCGVGIDLGTTYSCVAVWVDEHNRVEIIHNDQGNKTTPSFVAFTHEQRLIGDAAKNQAAANPENTVF 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme115087g00001 76 FunFam heat shock 70 kDa protein-like 6 76 - -
Trme115087g00001 76 ProSitePatterns Heat shock hsp70 proteins family signature 1. 15 22 IPR018181 -
Trme115087g00001 76 PANTHER HEAT SHOCK PROTEIN 70KDA 13 76 IPR013126 GO:0005524|GO:0140662
Trme115087g00001 76 Gene3D - 1 76 - -
Trme115087g00001 76 SUPERFAMILY Actin-like ATPase domain 13 76 IPR043129 -
Trme115087g00001 76 PRINTS 70kDa heat shock protein signature 63 71 - -
Trme115087g00001 76 PRINTS 70kDa heat shock protein signature 11 24 - -
Trme115087g00001 76 PRINTS 70kDa heat shock protein signature 41 53 - -
Trme115087g00001 76 Pfam Hsp70 protein 13 76 IPR013126 GO:0005524|GO:0140662
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme115087g00001 Trme-Chr115087 36 264 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme115087g00001 9 76 Calmodulin-binding Proteins AT3G12580 75.000 9.80e-31 110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme115087g00001 K03283 - gmx:102667578 128.642