Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11504g00001 ATGGGTTTTCGTTTCCCCGCTATCATCAGAATTGCATCATTTAATGCAAACCGAACAGTTTCAAAAGACGACGTACCTAAGGGATATCTTGCAGTGTATGTTGGAGACAAACAAAAACGGTATGTGATCCCCGTATCCTACTTGAACCAACCACTGTTTCAAGAGTTGTTGAGTCAAGCTGAGGAAGAGTTTGGATACGATCATCCAACGGGTGGCCTCACCATTCCTTGCACCGAAGATGTCTTTCAACATATAACATCTCGCTTCAATGGACTATGA 279 0.4301 MGFRFPAIIRIASFNANRTVSKDDVPKGYLAVYVGDKQKRYVIPVSYLNQPLFQELLSQAEEEFGYDHPTGGLTIPCTEDVFQHITSRFNGL 92
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11504g00001 92 Pfam Auxin responsive protein 13 87 IPR003676 GO:0009733
Trme11504g00001 92 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 18 88 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11504g00001 Trme-Chr11504 284 562 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11504g00001 24 85 Calmodulin-binding Proteins AT3G43120 54.839 2.78e-20 77.8