Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114796g00001 CGAAGAATAGCTCATATGTTTAAGCAAGACAAGGAAAACATACAAAGAAATGTTAGAGGGCAATTTTACGACAGTGAAAGACATGTGAAGAACTTGATAGACATGGAGGGATTGGAAGAGAATGACAATGATGGAATAGAGGTTCCCTATTTCGATTTTGAGAGCATACTTATCGCCACAGATGACTTTTCAGATGCAAATAAACTTGGAAAAGGTGGTTTTGGGCCAGTTTACAAGGGTAAGCTTGGTGGTCAAGAAATTGCAGTAAAGAGACTTTCAAGTGTTTCGTCACAAGGCTTACAGGAATTCAAGAATGAGGTTGTTTTGATTGCTAAACTTCAGCATCGAAAC 351 0.3846 RRIAHMFKQDKENIQRNVRGQFYDSERHVKNLIDMEGLEENDNDGIEVPYFDFESILIATDDFSDANKLGKGGFGPVYKGKLGGQEIAVKRLSSVSSQGLQEFKNEVVLIAKLQHRN 117
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114796g00001 117 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 16 117 - -
Trme114796g00001 117 ProSiteProfiles Protein kinase domain profile. 63 117 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme114796g00001 117 FunFam Uncharacterized protein 24 117 - -
Trme114796g00001 117 Gene3D Phosphorylase Kinase; domain 1 23 117 - -
Trme114796g00001 117 SUPERFAMILY Protein kinase-like (PK-like) 46 117 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114796g00001 Trme-Chr114796 106 642 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114796g00001 51 117 Receptor kinase-like Gene Family AT4G04510 69.118 3.26e-25 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Trme114796g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114796g00001 - - tpra:123882048 209.92