Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114625g00001 ATGCTTAATGAAAATCTAAAATCTGCAGAAGGTTCAGACCCCTTGCTTTATTCTGGAAAGATTATCGAGTGTGCTTGGGATGCTGATAGAAACGAATGGATATTCAAGCGAGTCAGAACAGACAAGTCAACTCCCAATGACATCAATACTTACAAGAAG 159 0.3899 MLNENLKSAEGSDPLLYSGKIIECAWDADRNEWIFKRVRTDKSTPNDINTYKK 53
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114625g00001 53 Gene3D - 3 53 IPR012340 -
Trme114625g00001 53 PANTHER MRNA-CAPPING ENZYME 9 52 - -
Trme114625g00001 53 SUPERFAMILY Nucleic acid-binding proteins 16 53 IPR012340 -
Trme114625g00001 53 Pfam mRNA capping enzyme, C-terminal domain 16 53 IPR013846 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114625g00001 Trme-Chr114625 36 194 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114625g00001 10 53 Protein tyrosine phosphatase (PTP) family AT3G09100 63.636 6.44e-16 67.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114625g00001 K13917 - lja:Lj0g3v0256839.1 86.2705