Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114585g00001 CAGGTTTTCTTTGCGTTAACTATGGCGGCTATTGGTATTTCTCAGTCAAGTTCCTTTGCTCCTGACTCAAGTAAAGCAAAGTCTGCTACTGCTTCCATATTCGGAATGATTGATAAAAAATCAAAGATCGATCCAACTGACGAATCTGGTACCACTCTAGATAGCGTTAAAGGCGAAATTGAGCTTCGTCATGTTAGTTTCAAGTATCCATCTCGGCCTGATATTCAGATTTTCCGAGACCTCAACTTGAACATCCATTCTGGCAAGGTGAAATCACACTTGATGGGATCGAAATTCGTCAGTTACAGCTGA 312 0.4135 QVFFALTMAAIGISQSSSFAPDSSKAKSATASIFGMIDKKSKIDPTDESGTTLDSVKGEIELRHVSFKYPSRPDIQIFRDLNLNIHSGKVKSHLMGSKFVSYS 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114585g00001 103 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 2 90 IPR039421 -
Trme114585g00001 103 FunFam ABC transporter B family member 9 27 49 - -
Trme114585g00001 103 Gene3D ABC transporter type 1, transmembrane domain 1 49 IPR036640 GO:0005524|GO:0016020
Trme114585g00001 103 Gene3D - 50 90 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114585g00001 Trme-Chr114585 1 515 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114585g00001 3 97 Calmodulin-binding Proteins AT2G36910 42.105 2.43e-15 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114585g00001 K05658 - gmx:100800034 163.31