Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11452g00001 CCTAATCAGATTATATCGGATTTTGCGTTCTTGCCTTTTGGTGGCGGACCTCGAAAATGCGTTGGGGACCAATTTGCTCTCATGGAGTCCACTGTAGCACTGACTATGCTACTACAGAATTTCGACGTGGAATTGAAGGGGACCCCTGAATCGGTTGAACTAGTTACCGGGGCAACTATCCATACCAAAAATGGATTGTGGTGCAATTTGAGGAAGAGATCTTCTGTACATTGA 234 0.453 PNQIISDFAFLPFGGGPRKCVGDQFALMESTVALTMLLQNFDVELKGTPESVELVTGATIHTKNGLWCNLRKRSSVH 77
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11452g00001 77 PRINTS E-class P450 group I signature 20 43 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme11452g00001 77 PRINTS E-class P450 group I signature 10 20 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme11452g00001 77 Gene3D Cytochrome P450 1 77 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme11452g00001 77 Pfam Cytochrome P450 5 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme11452g00001 77 PANTHER CYTOCHROME P450 FAMILY 4 6 73 - -
Trme11452g00001 77 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 13 22 IPR017972 GO:0005506|GO:0016705
Trme11452g00001 77 SUPERFAMILY Cytochrome P450 5 73 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11452g00001 Trme-Chr11452 3 236 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11452g00001 1 74 Cytochrome P450 AT4G15110 82.432 1.47e-41 140
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11452g00001 K24543 - gmx:606504 149.443