Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114513g00001 CTCTCTTACGATGCATTGAAATCCACCGCAAAGAATAAGGAACTTCCTAGGTTTTCCTTGGACAGCAAGCAAGGATCCAATAGAGGGATCGAAGGAGGAAACAAGGCTCGCAATCTGTTGAATGGTTCACCAAGAGGGTATGAGAGGAACTCGAGCACAATGCTTAATAAATTGCAAGAACCAGAAACATCAAAAAGATCAACGAGTGTTGTAGCTAAGTTGATGGGACTAGAAGTTCTCCCNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNAGTGGTGAATCCAAGAAACACCAAAGTTCGGTGTCCCCAAGGAATAGAAGGGGTGATGATTCAATCACAAATGTGAAACCTTGTTCGCAATTTGCACTAGAACCGACTACTCCTTGGAGGCAACCTGATGCAGGCCAAAGTTCTTTGTTACAAGATTCTTCAAAGGGAAGTGATTCTGATATAAAAGCATCAAAGCCTTCCCTTTCTGTATATGGCGAAATTGAGCAAAGGCTGACGGAACTCGAGTTCAAAAAGTCCGGAAAGGATCTCAGAGCACTTAAACATATCCTTGAAGCAATGCAGAGATTTACTGATTCATCATCTGACA 643 0.3779 LSYDALKSTAKNKELPRFSLDSKQGSNRGIEGGNKARNLLNGSPRGYERNSSTMLNKLQEPETSKRSTSVVAKLMGLEVLPXXXXXXXXXXXXXXXXXXXXXXXXSGESKKHQSSVSPRNRRGDDSITNVKPCSQFALEPTTPWRQPDAGQSSLLQDSSKGSDSDIKASKPSLSVYGEIEQRLTELEFKKSGKDLRALKHILEAMQRFTDSSSD 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114513g00001 214 PANTHER LONGIFOLIA PROTEIN 4 206 IPR033334 GO:0051513
Trme114513g00001 214 MobiDBLite consensus disorder prediction 1 69 - -
Trme114513g00001 214 MobiDBLite consensus disorder prediction 120 169 - -
Trme114513g00001 214 MobiDBLite consensus disorder prediction 90 174 - -
Trme114513g00001 214 MobiDBLite consensus disorder prediction 44 69 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114513g00001 Trme-Chr114513 1 643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114513g00001 1 214 TRM (TON1 Recruiting Motif) Superfamily AT3G02170 36.638 8.04e-22 91.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114513g00001 - - mtr:25497547 286.96