Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114324g00001 TATGGCCCTGACAGACCCAAGTACTTGGGTCCATTCTCAGAACAAATTCCATCATACCTGACTGGTGAATTTCCTGGTGACTATGGATGGGACACTGCTGGATTATCAGCTGACCCTGAAACCTTTGCAAAGAACCGTGAGCTTGAAGTAATTCACAGCAGATGGGCTATGCTTGGAGCATTGGGA 186 0.4731 YGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALG 62
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114324g00001 62 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 1 62 IPR001344 GO:0009765|GO:0016020
Trme114324g00001 62 Pfam Chlorophyll A-B binding protein 17 62 IPR022796 -
Trme114324g00001 62 SUPERFAMILY Chlorophyll a-b binding protein 1 62 - -
Trme114324g00001 62 Gene3D Chlorophyll a/b binding protein domain 7 62 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114324g00001 Trme-Chr114324 458 643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114324g00001 1 62 Chloroplast and Mitochondria Gene Families AT2G05070 95.161 7.60e-39 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114324g00001 K08913 - gmx:100815789 135.576