Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114310g00001 ATGCAAAGGCAATTCTATCACCAATCTGATCTTTCTTTCGGAACCATGAAGGAGGAATGTTTCCCCCTGGAATCATACCCTGAAATCGCTGCTTTCATAGATTGTGATTCTCCTTCATATGCCAGTGTATCATCTAGCAAGAGTCCATTTTCTCCGCAAGATTCTCAATCTCAATCATGCCATTCAGATCATCAACAATCATCTGACAACACCTATGGATCGCCAATAAGCGGAATGTCCAGTGTTGACGATGGCCATGATTTGAAGCACAAACTTAGAGAACTGGAGAATTCGTTGTTGGGGTCTGATGATTTCGATATTGTTGACAGTTACGGAAACTGCATGGAGACTAGACTCCACGGAGCATCTCCATCAGCTAAATATGATTGGGATCTAATTGCAGAAAACATTCAAAAGCTTGACTTGAAAGAAGTCCTCTTGCTATGTGCACAGGCTGTGTCTGATGGTGATATTCCAACAGCAAGAGGCTGGATGGATAATGTATTGGTGAAGATGGTATCAGTCGCTGGAGATCCAATCCAGAGGTTAAGTGCTTACTTGTTGGAAGGGCTTAGAGCTAGATTAGAATCGTC 593 0.4266 MQRQFYHQSDLSFGTMKEECFPLESYPEIAAFIDCDSPSYASVSSSKSPFSPQDSQSQSCHSDHQQSSDNTYGSPISGMSSVDDGHDLKHKLRELENSLLGSDDFDIVDSYGNCMETRLHGASPSAKYDWDLIAENIQKLDLKEVLLLCAQAVSDGDIPTARGWMDNVLVKMVSVAGDPIQRLSAYLLEGLRARLESS 198
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114310g00001 198 ProSiteProfiles GRAS family profile. 133 198 IPR005202 -
Trme114310g00001 198 MobiDBLite consensus disorder prediction 38 80 - -
Trme114310g00001 198 Pfam GRAS domain family 142 197 IPR005202 -
Trme114310g00001 198 MobiDBLite consensus disorder prediction 38 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114310g00001 Trme-Chr114310 51 643 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114310g00001 17 198 GRAS Transcription Factor Family AT4G17230 49.189 7.94e-40 140
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme114310g00001 GRAS 9.7e-07 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114310g00001 - - gmx:100792931 214.927