Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114174g00001 GAGAAACTCACTTATCTAAACTGTGTCGTCAAAGAGACATTGCGTCTTCACCCGCCGGTTCCCCTTCTCCTCCATGAAACGGCGGAAGACGCGACAATTCGTGGTTATTTTGTCCCCAAGGGCTCGCGCGTGATGATAAACGTGTGGGCTATAGGCAGAGACAAAGACGCGTGGGAAGATCCAGAAGAATTTAAGCCTTCACGGTTTCTTAATTCAAGCGCACCCAATTTTAAAGGAAGTAATTTTGAGTTTATTCCATTCGGGTCAGGTCGAAGATCTTGCCCCGGGATGCAATTGAGCATGTATGCATTAGACTTGGCTTTGGCCCATTTACTTCATTGCTTTACGTGGGAGTTACCTAATGGGATGAAGCCGAATGAAATGGATATGAATGATGTTTGTGGACTCAGTGCTCCTAGAGCGAGTCGACTTATTGTTGTTCCAGCTAAGCGTGTTGTGTGCTCTCTCTGA 471 0.465 EKLTYLNCVVKETLRLHPPVPLLLHETAEDATIRGYFVPKGSRVMINVWAIGRDKDAWEDPEEFKPSRFLNSSAPNFKGSNFEFIPFGSGRRSCPGMQLSMYALDLALAHLLHCFTWELPNGMKPNEMDMNDVCGLSAPRASRLIVVPAKRVVCSL 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114174g00001 156 SUPERFAMILY Cytochrome P450 2 150 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS E-class P450 group I signature 47 71 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS E-class P450 group I signature 7 25 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS E-class P450 group I signature 84 94 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS E-class P450 group I signature 94 117 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS P450 superfamily signature 8 19 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS P450 superfamily signature 94 105 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 PRINTS P450 superfamily signature 85 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 87 96 IPR017972 GO:0005506|GO:0016705
Trme114174g00001 156 PANTHER CYTOCHROME P450 84A1-RELATED 1 156 - -
Trme114174g00001 156 Pfam Cytochrome P450 2 132 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114174g00001 156 Gene3D Cytochrome P450 1 146 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114174g00001 Trme-Chr114174 3 473 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114174g00001 1 156 Monolignol Biosynthesis Gene Families AT4G36220 71.795 3.06e-86 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114174g00001 K09755 - gmx:100807448 255.758