Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11416g00001 ATGGCTTTGCTGCTAGTTTTCTCTAGCAGATACACTATAGCAGAAAAGAAAACACAGAATCCTAAAAGAACATACATAATTCACATGGACAAGTTCAACATGCCAGCAAGTTTCGATGATCATCTCCAATGGTATGATTCATCACTAAAATTAGTATCAGAAACTGCAGAGATGCTGTATACCTACAAACATGTAGCTCATGGCTTCTCCACAAGGCTAACTACTCAAGAAGCAGACTTACTCACAAAGCAACCGGGAATTCTCTCGGTTATCCCTGAAGTTAGATATGAGCTTCACACAACTCGAACACCAGAGTTCCTTGGATTGGAGAAAACAAAAACTCTTCTAGGGTCCTATGGGAAACAAAGCGAGGTGATTGTTGGAGTAATTGACACTGGTGTATGGCCTGAACTAAAAAGCTTCGACGACACTGGACTTGGACCAGTACCCAGTAGCTGGAAAGGGGAATGTGAGACAGGTAAAAACTTTAACTCATCAAACTGTAACAAAAAACTTGTTGGTGCAAGGTTTTTTGCTAAAGGCTATGAGGCAGCTTTTGGACCCATTGATGAAAAGACAGAATCAAAGTCACCTAGGGATGATGATGGGCATGGAAGTCACACCTCAACTACAGCAGCAGGTTCTGCAGTTGCAGGGGCAAGCCTCTTTGGTTTTGCTTCTGGGACAGCAAAAGGCATGGCCACACAAGCTCGAGTGGCCACTTACAAAGTGTGTTGGCTTGGTGGGTGCTTCACAACAGACATAGTTGCTGCAATCGATAAGGCCATCGAAGACGGTGTCAACATCCTCTCTATGTCTATTGGTGGAGGTTTAAGGGACTACTACAGAGACACTGTTGCAATGGGAACTTTTGCAGCCACAGAACATGGAATACTAGTCTCCAGTTCAGCAGGAAATGGTGGACCTAGTCAAGCAACTTTGGCTAATGTTGCGCCATGGATAACCAGTGTGGGTGCTGGAACTATAGACCGTGATTTCCCAGCCTATATCACCCTTGGAAATGGAAAGAGATACAACGGCGTGTCTCTTTACAATGGAAAATTGCCACCTGATTCTCCACTGCCACTTGTTTATGCTGCTAATGTCGGTCAGGATTCGACCGATGGCCTGTGCACCACAGATAGTTTGATTCCTAGTAAAGTTTCAGGAAAAATCGTGATATGTGACCGAGGAGGAAATCCTAGAGCCGAAAAGAGTTTGGTGGTCAAGCGTGCAGGAGGAATTGGGATGATTTTAGCAAACAAAGAAGATTATGGGGAAGAGCTAGTTGCTGACGCCTATCTCCTCCCTGCAGCAGCTTTGGGAGAGAAAGCAAGCAATGAAGTAAAGAAGTATGTTTCTTCTRCTCCCAATCCAACTGCTAAAATTGCATTCGGCGGTACSCAATTAGGGGTTCAACCATCCCCAGTGGTGGCAGCTTTCAGCTCTAGAGGACCAAATATACTTACGCCAAAAATACTCAAACCAGACCTCATAGCTCCAGGAGTCAACATTCTAGCTGGATGGTCAGGGAAAGTTGGACCAACTGGCTTGGCTGTTGACACAAGGCATGTGAGCTTCAACATCATCTCTGGCACATCCATGTCATGCCCCCATGTAAG 1622 0.4507 MALLLVFSSRYTIAEKKTQNPKRTYIIHMDKFNMPASFDDHLQWYDSSLKLVSETAEMLYTYKHVAHGFSTRLTTQEADLLTKQPGILSVIPEVRYELHTTRTPEFLGLEKTKTLLGSYGKQSEVIVGVIDTGVWPELKSFDDTGLGPVPSSWKGECETGKNFNSSNCNKKLVGARFFAKGYEAAFGPIDEKTESKSPRDDDGHGSHTSTTAAGSAVAGASLFGFASGTAKGMATQARVATYKVCWLGGCFTTDIVAAIDKAIEDGVNILSMSIGGGLRDYYRDTVAMGTFAATEHGILVSSSAGNGGPSQATLANVAPWITSVGAGTIDRDFPAYITLGNGKRYNGVSLYNGKLPPDSPLPLVYAANVGQDSTDGLCTTDSLIPSKVSGKIVICDRGGNPRAEKSLVVKRAGGIGMILANKEDYGEELVADAYLLPAAALGEKASNEVKKYVSSXPNPTAKIAFGGTQLGVQPSPVVAAFSSRGPNILTPKILKPDLIAPGVNILAGWSGKVGPTGLAVDTRHVSFNIISGTSMSCPHV 540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11416g00001 540 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 7 99 IPR037045 -
Trme11416g00001 540 Gene3D Peptidase S8/S53 domain 125 540 IPR036852 GO:0004252|GO:0006508
Trme11416g00001 540 CDD PA_subtilisin_like 336 463 - -
Trme11416g00001 540 CDD Peptidases_S8_3 96 540 IPR034197 -
Trme11416g00001 540 SUPERFAMILY Subtilisin-like 98 540 IPR036852 GO:0004252|GO:0006508
Trme11416g00001 540 FunFam subtilisin-like protease SBT1.5 330 470 - -
Trme11416g00001 540 SUPERFAMILY PA domain 360 425 IPR046450 -
Trme11416g00001 540 Pfam Subtilase family 123 540 IPR000209 GO:0006508|GO:0008236
Trme11416g00001 540 FunFam Subtilisin-like protease SBT1.9 13 99 - -
Trme11416g00001 540 Pfam PA domain 362 446 IPR003137 -
Trme11416g00001 540 MobiDBLite consensus disorder prediction 189 206 - -
Trme11416g00001 540 MobiDBLite consensus disorder prediction 189 211 - -
Trme11416g00001 540 Gene3D - 330 471 - -
Trme11416g00001 540 ProSiteProfiles Serine proteases, subtilase domain profile. 95 540 - -
Trme11416g00001 540 Pfam Peptidase inhibitor I9 24 99 IPR010259 -
Trme11416g00001 540 PRINTS Subtilisin serine protease family (S8) signature 200 213 IPR015500 -
Trme11416g00001 540 PRINTS Subtilisin serine protease family (S8) signature 122 141 IPR015500 -
Trme11416g00001 540 PRINTS Subtilisin serine protease family (S8) signature 531 540 IPR015500 -
Trme11416g00001 540 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 25 540 IPR045051 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11416g00001 Trme-Chr11416 32 1653 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11416g00001 24 540 Subtilisin-like Serine Gene Family AT5G67360 67.761 0.0 740
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11416g00001 - - gmx:100794284 899.427