Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114169g00001 GTTCATTTAGATGAGAAGATATTCAATGGAGCTAAAAACTTCAATCCTTGGAGATGGATGGAACCTGAAAATGAGGAAAAGAGAAATTGGAGAACAAGTCCATTTTATGCACCCTTTGGAGGAGGTGCTAGATTTTGTCCAGGAGCTGAATTGGCTCGTCTTCAAATTGCTCTTTTTCTTCATTACTTTGTAACAAACTATAGGTAA 207 0.372 VHLDEKIFNGAKNFNPWRWMEPENEEKRNWRTSPFYAPFGGGARFCPGAELARLQIALFLHYFVTNYR 68
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114169g00001 68 Gene3D Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114169g00001 68 SUPERFAMILY Cytochrome P450 1 68 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114169g00001 68 PANTHER CYTOCHROME P450 26 1 67 - -
Trme114169g00001 68 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 39 48 IPR017972 GO:0005506|GO:0016705
Trme114169g00001 68 PRINTS E-class P450 group IV signature 46 64 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114169g00001 68 PRINTS E-class P450 group IV signature 2 20 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114169g00001 68 PRINTS E-class P450 group IV signature 30 46 IPR002403 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme114169g00001 68 Pfam Cytochrome P450 1 68 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114169g00001 Trme-Chr114169 70 364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114169g00001 1 68 Cytochrome P450 AT1G73340 73.529 4.34e-37 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114169g00001 - - mtr:11414632 147.517