Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114069g00001 TTTGCTGCCAAAGGTCTAGATGATCATGACCTTGTTACCTTACTTGGTGCACATACCATAGGCCAAACAGATTGCAGATTCTTTAGTTATCGTCTATACAATTTCACAACCACCGGCAATGCTGATCCTACTATTAACCAAGCTTTCTTAGCTCAACTTAAAGTACTATGTCCAAAAAATGGTGATGGCTTGAGAAGGGTGGCTTTGGACAAAGATAGTCCAGCCAAATTTGATGTGAGTTTCTTCAAAAATGTACGCGATGGTAACGGGATTCTCGAATCAGATCAAAGGCTGTGGGAAGATTCTGCTACAAGAAGGGTGGTGCAAAATTATGGTGGGAATTTTAGAGGGTTATTGGGGTTTAGATTTGATTTTGAATTTCCAAAGGCTATGATTAAGTTGAGTAATGTAGATGTGAAGACTGGTATTGATGGAGAGATTAGAAAAGTGTGCTCAAAATTTAATTGA 468 0.3868 FAAKGLDDHDLVTLLGAHTIGQTDCRFFSYRLYNFTTTGNADPTINQAFLAQLKVLCPKNGDGLRRVALDKDSPAKFDVSFFKNVRDGNGILESDQRLWEDSATRRVVQNYGGNFRGLLGFRFDFEFPKAMIKLSNVDVKTGIDGEIRKVCSKFN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114069g00001 155 ProSiteProfiles Plant heme peroxidase family profile. 1 155 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 ProSitePatterns Peroxidases proximal heme-ligand signature. 10 20 IPR019793 -
Trme114069g00001 155 FunFam Peroxidase 1 134 - -
Trme114069g00001 155 PRINTS Plant peroxidase signature 68 83 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 PRINTS Plant peroxidase signature 84 101 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 PRINTS Plant peroxidase signature 129 142 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 PRINTS Plant peroxidase signature 9 21 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 Pfam Peroxidase 1 112 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 PRINTS Haem peroxidase superfamily signature 70 85 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 PRINTS Haem peroxidase superfamily signature 10 25 IPR002016 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 Gene3D Peroxidase, domain 2 1 134 - -
Trme114069g00001 155 PANTHER - 1 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Trme114069g00001 155 SUPERFAMILY Heme-dependent peroxidases 1 155 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114069g00001 Trme-Chr114069 11 644 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114069g00001 1 155 Peroxidase AT2G41480 73.548 1.72e-82 244
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114069g00001 K00430 - gmx:100816487 275.789