Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme114058g00001 GATAGATATTTGAAGCCGTGGATTATTCCCGAACCTGAAGTTACATTCCTCCCTCGTGCAAAAGACGATGAATGTCTTATTCTGGCCAGTGATGGCTTGTGGGATGTCATGACGAATGAAGAAGCATGTGACTTAGCTCGGAGACGCATACTTCTCTGGCACAAGAAAAATGGCTCGGAGCTGTCCTCACTAAGGGGAGAGGGAATCGATCCTGCAGCACAGGCAGCTGCAGAGTACCTATCAAACCGTGCTTTGCAGAAAGGGAGCAAAGATAACATCACTGTGATCGTGGTAGATTTGAAAGCGCAACGAAAATTTAAGAGTAAATCATGA 333 0.4595 DRYLKPWIIPEPEVTFLPRAKDDECLILASDGLWDVMTNEEACDLARRRILLWHKKNGSELSSLRGEGIDPAAQAAAEYLSNRALQKGSKDNITVIVVDLKAQRKFKSKS 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme114058g00001 110 FunFam Protein phosphatase 2C 50 1 108 - -
Trme114058g00001 110 Pfam Protein phosphatase 2C 1 93 IPR001932 -
Trme114058g00001 110 ProSiteProfiles PPM-type phosphatase domain profile. 1 100 IPR001932 -
Trme114058g00001 110 CDD PP2Cc 1 100 IPR001932 -
Trme114058g00001 110 Gene3D - 1 110 IPR036457 -
Trme114058g00001 110 PANTHER PROTEIN PHOSPHATASE 1 100 IPR015655 GO:0004722|GO:0006470
Trme114058g00001 110 SUPERFAMILY PP2C-like 2 101 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme114058g00001 Trme-Chr114058 217 549 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme114058g00001 1 110 PP2C-type Phosphatase Gene Family AT1G17550 71.818 2.72e-54 174
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme114058g00001 K14497 - gmx:102662702 209.92