Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme113982g00001 AAAACACTTACTATGCTCAATCATTGGTCTAATGTGGAAGAAGAGAATAAAACCATTGATGGTAACATGAAGGATTCTCATTGTTCTTTTACAAACGAGAGTCCCAAAAGTGAGGTTATTATTAAGAACAAAGCTCTCTTCAAGAAAAGAAAGAGCATGGACACATGGAAAGAGCAAGTGAAGATTTGTACAAACACAGGATTGTTTGAAGGGTCTTTGGATGATGAATATAGCTGGAGAAAATATGGTCAAAAGGATATTCTTGGAGCTAAGTTTTCAAG 281 0.3523 KTLTMLNHWSNVEEENKTIDGNMKDSHCSFTNESPKSEVIIKNKALFKKRKSMDTWKEQVKICTNTGLFEGSLDDEYSWRKYGQKDILGAKFS 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme113982g00001 93 Gene3D WRKY domain 48 93 IPR036576 GO:0003700|GO:0006355|GO:0043565
Trme113982g00001 93 Pfam WRKY DNA -binding domain 74 92 IPR003657 GO:0003700|GO:0006355|GO:0043565
Trme113982g00001 93 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 25 92 IPR044810 GO:0003700
Trme113982g00001 93 SUPERFAMILY WRKY DNA-binding domain 72 92 IPR036576 GO:0003700|GO:0006355|GO:0043565
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme113982g00001 48 92 WRKY Transcription Factor Family AT4G11070 66.667 3.34e-13 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Trme113982g00001 WRKY 1.7e-05 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme113982g00001 - - mtr:11429817 133.65