Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme11384g00001 ATGGTGTCTCTCTCTGCGGCTAAGCATTCCGAATCCGAACAAGTGACATCCTCCGCTTTCGCTTCTGCTAAGATGTTCACATCAAGGAAGAAAATCAGCAAAGATAAGGGTGCTGAACCAACTGAATTTGAGGAATCGGTTGGACAGGCTTTGTTTGATCTAGAAAATACCAACAATGAGCTGAAAAGTGAGCTCAAAGATTTATACATAAATTCAGCAGTCCAAATCGATGTTTCTGGCAACCGTAAGGCTGTGCTTATCCAAGTCCCATACAGACTGAGGAAGGGTTTCCGCAAAATTCATGTTAGGCTTGTTAGGGAGCTTGAGAAGAAATTTAGCGGCAAG 345 0.4319 MVSLSAAKHSESEQVTSSAFASAKMFTSRKKISKDKGAEPTEFEESVGQALFDLENTNNELKSELKDLYINSAVQIDVSGNRKAVLIQVPYRLRKGFRKIHVRLVRELEKKFSGK 115
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme11384g00001 115 PANTHER 40S RIBOSOMAL PROTEIN S7 25 115 IPR000554 GO:0003735|GO:0005840|GO:0006412
Trme11384g00001 115 Pfam Ribosomal protein S7e 31 115 IPR000554 GO:0003735|GO:0005840|GO:0006412
Trme11384g00001 115 Coils Coil 51 71 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme11384g00001 Trme-Chr11384 25 1033 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme11384g00001 25 115 Cytoplasmic Ribosomal Protein Gene Family AT3G02560 79.121 2.85e-49 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme11384g00001 K02993 - gmx:100527642 169.474